Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family protein | SCAB_RS07900 | Not Available | Negative | 1884737 - 1886017 | 45426.5 |
| substrate-binding domain-containing protein | SCAB_RS07905 | Not Available | Negative | 1886095 - 1887132 | 36614.5 |
| abc transporter permease | SCAB_RS07910 | Not Available | Negative | 1887169 - 1888185 | 34935.3 |
| sugar abc transporter atp-binding protein | SCAB_RS07915 | Not Available | Negative | 1888182 - 1889786 | 56319.9 |
| rok family transcriptional regulator | SCAB_RS07920 | Not Available | Negative | 1889949 - 1891130 | 40100.5 |
| gntr family transcriptional regulator | SCAB_RS07925 | Not Available | Negative | 1891461 - 1892135 | 24554.2 |
| beta-ketoacyl-acp synthase iii | SCAB_RS07930 | Not Available | Negative | 1892337 - 1893275 | 32006.2 |
| glycosyltransferase family 2 protein | SCAB_RS07935 | Not Available | Negative | 1893495 - 1894511 | 37014.9 |
| gtra family protein | SCAB_RS07940 | Not Available | Positive | 1894635 - 1895105 | 16983.8 |
| hypothetical protein | SCAB_RS07945 | Not Available | Positive | 1895160 - 1896605 | 52076.8 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |