Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | SCAB_RS49240 | Not Available | Positive | 1818883 - 1819095 | 7684.44 |
| type ii toxin-antitoxin system rele/pare family toxin | SCAB_RS49245 | Not Available | Positive | 1819096 - 1819239 | 5381.28 |
| xre family transcriptional regulator | SCAB_RS07655 | Not Available | Positive | 1819236 - 1819577 | 12224.6 |
| duf5753 domain-containing protein | SCAB_RS07660 | Not Available | Negative | 1820239 - 1821093 | 31130.4 |
| duf6879 family protein | SCAB_RS07665 | Not Available | Negative | 1821100 - 1821615 | 20101.3 |
| hypothetical protein | SCAB_RS07670 | Not Available | Negative | 1821590 - 1821841 | 9033.57 |
| duf6415 family natural product biosynthesis protein | SCAB_RS07675 | Not Available | Positive | 1822072 - 1822446 | 13341.2 |
| hypothetical protein | SCAB_RS07680 | Not Available | Positive | 1822567 - 1823067 | 18792.6 |
| class i sam-dependent methyltransferase | SCAB_RS07685 | Not Available | Positive | 1823147 - 1823800 | 23284.6 |
| endonuclease domain-containing protein | SCAB_RS07690 | Not Available | Negative | 1823925 - 1825286 | 49751.8 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |