Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | SCAB_RS43680 | Not Available | Negative | 1796289 - 1799336 | 110640.0 |
| protein kinase domain-containing protein | SCAB_RS07610 | Not Available | Positive | 1799594 - 1805947 | 234240.0 |
| dead/deah box helicase | SCAB_RS07615 | Not Available | Positive | 1805977 - 1808943 | 106915.0 |
| eco57i restriction-modification methylase domain-containing protein | SCAB_RS07620 | Not Available | Positive | 1808943 - 1812974 | 148981.0 |
| ecsc family protein | SCAB_RS07625 | Not Available | Positive | 1813040 - 1814173 | 39361.6 |
| competence protein coia family protein | SCAB_RS43685 | Not Available | Positive | 1814419 - 1817265 | 104370.0 |
| duf397 domain-containing protein | SCAB_RS43690 | Not Available | Negative | 1817272 - 1817424 | 5825.89 |
| winged helix-turn-helix domain-containing protein | SCAB_RS07635 | Not Available | Negative | 1817525 - 1817767 | 8733.55 |
| hypothetical protein | SCAB_RS07640 | Not Available | Positive | 1817919 - 1818266 | 12818.7 |
| hypothetical protein | SCAB_RS07645 | Not Available | Positive | 1818263 - 1818499 | 8226.81 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |