Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| saccharopine dehydrogenase | SCAB_RS07505 | Not Available | Negative | 1770619 - 1771659 | 37574.8 |
| nad(p)/fad-dependent oxidoreductase | SCAB_RS07510 | Not Available | Negative | 1771656 - 1772801 | 40735.6 |
| gtp cyclohydrolase ii | SCAB_RS07515 | Not Available | Negative | 1772996 - 1773655 | 23839.5 |
| creatininase family protein | SCAB_RS44575 | Not Available | Positive | 1773734 - 1774528 | 27619.6 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS48350 | Not Available | Negative | 1774642 - 1775613 | 32575.9 |
| class i sam-dependent methyltransferase | SCAB_RS07530 | Not Available | Negative | 1775610 - 1776578 | 33426.6 |
| glycosyltransferase family 4 protein | SCAB_RS07535 | Not Available | Negative | 1776575 - 1777816 | 43588.3 |
| 6-pyruvoyl trahydropterin synthase family protein | SCAB_RS07540 | Not Available | Negative | 1777813 - 1778211 | 14555.2 |
| zinc-dependent alcohol dehydrogenase | SCAB_RS07545 | Not Available | Negative | 1778380 - 1779360 | 34659.4 |
| cdp-alcohol phosphatidyltransferase family protein | SCAB_RS07550 | Not Available | Positive | 1779468 - 1780283 | 28107.7 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |