Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-mannosidase | SCAB_RS07305 | Not Available | Negative | 1720157 - 1723204 | 112146.0 |
| 6-phospho-beta-glucosidase | SCAB_RS07310 | Not Available | Negative | 1723288 - 1724628 | 48115.5 |
| deor/glpr family dna-binding transcription regulator | SCAB_RS07315 | Not Available | Negative | 1724759 - 1725508 | 26782.3 |
| carbohydrate kinase family protein | SCAB_RS07320 | Not Available | Positive | 1725659 - 1726669 | 35474.7 |
| abc transporter substrate-binding protein | SCAB_RS07325 | Not Available | Positive | 1726732 - 1728012 | 45484.7 |
| carbohydrate abc transporter permease | SCAB_RS07330 | Not Available | Positive | 1728137 - 1729021 | 33103.9 |
| carbohydrate abc transporter permease | SCAB_RS07335 | Not Available | Positive | 1729018 - 1729887 | 31827.6 |
| alkaline phosphatase family protein | SCAB_RS07340 | Not Available | Positive | 1729914 - 1730918 | 34747.4 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | SCAB_RS07345 | Not Available | Positive | 1730915 - 1733872 | 107427.0 |
| lamg-like jellyroll fold domain-containing protein | SCAB_RS07350 | Not Available | Positive | 1733903 - 1735735 | 66939.4 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |