Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyphosphate polymerase domain-containing protein | SCAB_RS06860 | Not Available | Negative | 1619104 - 1619946 | 32309.6 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS48305 | Not Available | Positive | 1620440 - 1620785 | 12566.2 |
| hypothetical protein | SCAB_RS49365 | Not Available | Negative | 1620728 - 1620874 | 5336.41 |
| hypothetical protein | SCAB_RS48310 | Not Available | Positive | 1621009 - 1621497 | 16658.4 |
| 2'-5' rna ligase family protein | SCAB_RS06875 | Not Available | Negative | 1621633 - 1622256 | 23175.5 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS48980 | Not Available | Positive | 1622377 - 1622685 | 10464.5 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS06880 | Not Available | Positive | 1622703 - 1623554 | 31195.4 |
| cytochrome p450 | SCAB_RS06885 | Not Available | Negative | 1623708 - 1624967 | 46484.9 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS48315 | Not Available | Negative | 1625258 - 1625497 | 8890.93 |
| mfs transporter | SCAB_RS06890 | Not Available | Negative | 1625727 - 1626962 | 42319.2 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |