Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine pyrophosphate-dependent enzyme | SCAB_RS06670 | Not Available | Positive | 1569766 - 1571346 | 54465.9 |
| marr family winged helix-turn-helix transcriptional regulator | SCAB_RS48285 | Not Available | Positive | 1571401 - 1571916 | 18781.4 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS48975 | Not Available | Negative | 1572155 - 1572322 | 6217.6 |
| hypothetical protein | SCAB_RS43660 | Not Available | Positive | 1572683 - 1573285 | 21768.5 |
| helix-turn-helix domain-containing protein | SCAB_RS06685 | Not Available | Positive | 1573389 - 1574333 | 33656.1 |
| fad-dependent oxidoreductase | SCAB_RS06690 | Not Available | Positive | 1574460 - 1576250 | 65354.2 |
| maleylacetate reductase | SCAB_RS06695 | Not Available | Positive | 1576253 - 1577308 | 35859.2 |
| intradiol ring-cleavage dioxygenase | SCAB_RS06700 | Not Available | Positive | 1577305 - 1578201 | 32948.5 |
| hypothetical protein | SCAB_RS48295 | Not Available | Negative | 1578470 - 1578664 | 7334.89 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS48300 | Not Available | Positive | 1578704 - 1579096 | 14704.9 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |