Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase family protein | SCAB_RS43640 | Not Available | Negative | 1559976 - 1561334 | 47933.7 |
| zinc-binding dehydrogenase | SCAB_RS06625 | Not Available | Negative | 1561377 - 1562534 | 40258.4 |
| sdr family nad(p)-dependent oxidoreductase | SCAB_RS44505 | Not Available | Negative | 1562610 - 1563692 | 39148.5 |
| flavin reductase family protein | SCAB_RS06635 | Not Available | Negative | 1563628 - 1564185 | 19637.2 |
| duf1697 domain-containing protein | SCAB_RS43650 | Not Available | Negative | 1564185 - 1564739 | 19854.7 |
| class i sam-dependent methyltransferase | SCAB_RS06645 | Not Available | Negative | 1564736 - 1565578 | 30913.9 |
| acyl-coa dehydrogenase family protein | SCAB_RS06650 | Not Available | Negative | 1565614 - 1566891 | 46627.2 |
| marr family winged helix-turn-helix transcriptional regulator | SCAB_RS06655 | Not Available | Negative | 1566888 - 1567391 | 18057.6 |
| zinc-binding dehydrogenase | SCAB_RS06660 | Not Available | Positive | 1567786 - 1568742 | 32914.3 |
| sdr family nad(p)-dependent oxidoreductase | SCAB_RS06665 | Not Available | Positive | 1568816 - 1569769 | 32952.3 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |