Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylosuccinate lyase family protein | SCAB_RS06495 | Not Available | Positive | 1531385 - 1532839 | 49530.3 |
| 3-oxoadipate enol-lactonase | SCAB_RS06500 | Not Available | Positive | 1532836 - 1533957 | 39782.1 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS06505 | Not Available | Negative | 1534157 - 1536830 | 97542.2 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS06510 | Not Available | Positive | 1537127 - 1537409 | 9670.04 |
| duf2510 domain-containing protein | SCAB_RS06515 | Not Available | Positive | 1537704 - 1538756 | 35021.2 |
| tetr/acrr family transcriptional regulator | SCAB_RS06520 | Not Available | Negative | 1538926 - 1539540 | 22388.7 |
| phosphatase pap2 family protein | SCAB_RS06525 | Not Available | Positive | 1539819 - 1540622 | 29063.4 |
| hypothetical protein | SCAB_RS06530 | Not Available | Positive | 1540619 - 1541599 | 31909.9 |
| phosphocholine-specific phospholipase c | SCAB_RS06535 | Not Available | Negative | 1541644 - 1543695 | 74700.6 |
| helix-turn-helix domain-containing protein | SCAB_RS06540 | Not Available | Positive | 1544430 - 1545935 | 54263.7 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |