Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | SCAB_RS06345 | Not Available | Negative | 1494552 - 1496726 | 78067.6 |
| acetyl-coa c-acetyltransferase | SCAB_RS06350 | Not Available | Negative | 1496768 - 1497982 | 42311.5 |
| caib/baif coa transferase family protein | SCAB_RS06355 | Not Available | Negative | 1498029 - 1499240 | 41480.0 |
| saccharopine dehydrogenase family protein | SCAB_RS06360 | Not Available | Positive | 1499611 - 1500789 | 41790.7 |
| morphogenic membrane protein mmpa | SCAB_RS47525 | Not Available | Negative | 1500825 - 1500971 | 5031.26 |
| endonuclease v | SCAB_RS06370 | Not Available | Negative | 1501100 - 1501789 | 23882.6 |
| wd40/yvtn/bnr-like repeat-containing protein | SCAB_RS06375 | Not Available | Negative | 1501910 - 1502956 | 36542.4 |
| ssga family sporulation/cell division regulator | SCAB_RS06380 | Not Available | Positive | 1503275 - 1503691 | 15346.4 |
| abc-f family atp-binding cassette domain-containing protein | SCAB_RS06385 | Not Available | Positive | 1504000 - 1505631 | 59089.8 |
| dimethylargininase | SCAB_RS06390 | Not Available | Positive | 1505803 - 1506579 | 27751.2 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |