Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdp-alcohol phosphatidyltransferase family protein | SCAB_RS06200 | Not Available | Negative | 1462956 - 1463684 | 26335.8 |
| iron-containing alcohol dehydrogenase family protein | SCAB_RS06205 | Not Available | Negative | 1463713 - 1464777 | 37183.3 |
| sugar phosphate nucleotidyltransferase | SCAB_RS06210 | Not Available | Negative | 1464765 - 1465517 | 27328.7 |
| duf5941 domain-containing protein | SCAB_RS06215 | Not Available | Negative | 1465514 - 1467319 | 63153.3 |
| udp-glucose 4-epimerase gale | SCAB_RS06220 | Not Available | Positive | 1467706 - 1468674 | 34047.5 |
| cation diffusion facilitator family transporter | SCAB_RS06225 | Not Available | Positive | 1468842 - 1469780 | 32622.0 |
| gnat family n-acetyltransferase | SCAB_RS06230 | Not Available | Positive | 1469771 - 1470298 | 18383.9 |
| isopentenyl-diphosphate delta-isomerase | SCAB_RS06235 | Not Available | Positive | 1470424 - 1471017 | 21282.0 |
| atp-binding protein | SCAB_RS06240 | Not Available | Negative | 1471061 - 1471576 | 18132.6 |
| enoyl-coa hydratase/isomerase family protein | SCAB_RS06245 | Not Available | Positive | 1471824 - 1472567 | 26073.2 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |