Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dps family protein | SCAB_RS05915 | Not Available | Positive | 1401181 - 1401663 | 17837.3 |
| amidohydrolase family protein | SCAB_RS05920 | Not Available | Negative | 1401779 - 1403140 | 48828.2 |
| ntaa/dmoa family fmn-dependent monooxygenase | SCAB_RS05925 | Not Available | Negative | 1403302 - 1404648 | 49731.9 |
| llm class flavin-dependent oxidoreductase | SCAB_RS05930 | Not Available | Negative | 1404669 - 1405931 | 45397.6 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS44475 | Not Available | Negative | 1405946 - 1406825 | 31597.9 |
| abc transporter substrate-binding protein | SCAB_RS05935 | Not Available | Negative | 1406884 - 1407918 | 36386.7 |
| amino acid abc transporter atp-binding protein | SCAB_RS05940 | Not Available | Negative | 1407996 - 1408781 | 28336.2 |
| amino acid abc transporter permease | SCAB_RS05945 | Not Available | Negative | 1408778 - 1409764 | 35865.1 |
| glutathione s-transferase c-terminal domain-containing protein | SCAB_RS05950 | Not Available | Negative | 1410185 - 1411099 | 32524.8 |
| potassium channel family protein | SCAB_RS05955 | Not Available | Negative | 1411518 - 1411985 | 16882.5 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |