Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h:quinone oxidoreductase | SCAB_RS05765 | Not Available | Positive | 1365476 - 1366090 | 21598.2 |
| 3-hydroxybenzoate 6-monooxygenase | SCAB_RS05770 | Not Available | Positive | 1366323 - 1367528 | 43340.7 |
| peptide abc transporter substrate-binding protein | SCAB_RS05775 | Not Available | Positive | 1367574 - 1369064 | 54794.2 |
| duf6766 family protein | SCAB_RS05780 | Not Available | Positive | 1369255 - 1369470 | 7413.89 |
| abc transporter atp-binding protein | SCAB_RS05785 | Not Available | Negative | 1369491 - 1371383 | 67764.4 |
| lysylphosphatidylglycerol synthase transmembrane domain-containing protein | SCAB_RS05790 | Not Available | Positive | 1371531 - 1372499 | 33232.3 |
| mechanosensitive ion channel family protein | SCAB_RS05795 | Not Available | Positive | 1372814 - 1373896 | 38492.1 |
| nadp-dependent isocitrate dehydrogenase | SCAB_RS05800 | Not Available | Positive | 1374127 - 1376346 | 79203.7 |
| marr family winged helix-turn-helix transcriptional regulator | SCAB_RS05805 | Not Available | Positive | 1376638 - 1377057 | 15513.9 |
| glycoside hydrolase family 43 protein | SCAB_RS05810 | Not Available | Positive | 1377063 - 1378064 | 37141.0 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |