Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | SCAB_RS05715 | Not Available | Positive | 1353628 - 1354428 | 27716.2 |
| isochorismatase family protein | SCAB_RS05720 | Not Available | Positive | 1354553 - 1355230 | 24826.9 |
| phenazine-specific anthranilate synthase component i | SCAB_RS05725 | Not Available | Positive | 1355227 - 1357425 | 79437.2 |
| hypothetical protein | SCAB_RS05730 | Not Available | Positive | 1357456 - 1358160 | 25651.5 |
| sdr family nad(p)-dependent oxidoreductase | SCAB_RS05735 | Not Available | Positive | 1358331 - 1359104 | 26888.7 |
| scba/barx family gamma-butyrolactone biosynthesis protein | SCAB_RS05740 | Not Available | Negative | 1359264 - 1360265 | 36780.8 |
| scbr family autoregulator-binding transcription factor | SCAB_RS05745 | Not Available | Positive | 1360443 - 1361084 | 23257.1 |
| scbr family autoregulator-binding transcription factor | SCAB_RS05750 | Not Available | Negative | 1362008 - 1362730 | 25769.0 |
| transposase | SCAB_RS05755 | Not Available | Positive | 1362897 - 1364144 | 45552.5 |
| shikimate dehydrogenase family protein | SCAB_RS05760 | Not Available | Negative | 1364124 - 1365035 | 30764.1 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |