Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| precorrin-4 c(11)-methyltransferase | SCAB_RS04665 | Not Available | Negative | 1111251 - 1112000 | 26377.8 |
| bifunctional cobalt-precorrin-7 (c(5))-methyltransferase/cobalt-precorrin-6b (c(15))-methyltransferase | SCAB_RS04670 | Not Available | Negative | 1111997 - 1113283 | 44728.6 |
| duf2218 domain-containing protein | SCAB_RS04675 | Not Available | Positive | 1113678 - 1113974 | 10679.4 |
| arac family transcriptional regulator | SCAB_RS04680 | Not Available | Negative | 1114096 - 1115010 | 33676.3 |
| helix-turn-helix transcriptional regulator | SCAB_RS04685 | Not Available | Positive | 1115371 - 1118283 | 102682.0 |
| hypothetical protein | SCAB_RS04690 | Not Available | Negative | 1118276 - 1119136 | 29687.6 |
| s8 family serine peptidase | SCAB_RS04695 | Not Available | Negative | 1119384 - 1122953 | 123958.0 |
| srpbcc family protein | SCAB_RS04700 | Not Available | Negative | 1123267 - 1123716 | 16726.9 |
| peptidase inhibitor family i36 protein | SCAB_RS04705 | Not Available | Negative | 1124159 - 1124611 | 16044.4 |
| arsr/smtb family transcription factor | SCAB_RS04710 | Not Available | Positive | 1124753 - 1125739 | 36129.4 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |