Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | SCAB_RS04615 | Not Available | Positive | 1097637 - 1098338 | 24539.9 |
| cobaltochelatase subunit cobn | SCAB_RS04620 | Not Available | Negative | 1098393 - 1102022 | 130459.0 |
| precorrin-3b synthase | SCAB_RS04625 | Not Available | Positive | 1102301 - 1103635 | 45167.6 |
| precorrin-8x methylmutase | SCAB_RS04630 | Not Available | Positive | 1103737 - 1104369 | 21924.4 |
| precorrin-2 c(20)-methyltransferase | SCAB_RS04635 | Not Available | Positive | 1104366 - 1105856 | 53179.3 |
| cobalt-precorrin-6a reductase | SCAB_RS04640 | Not Available | Negative | 1105888 - 1106631 | 26182.7 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS04645 | Not Available | Positive | 1106650 - 1107807 | 38793.3 |
| abc transporter substrate-binding protein | SCAB_RS04650 | Not Available | Negative | 1107922 - 1108923 | 36128.2 |
| heme abc transporter atp-binding protein | SCAB_RS04655 | Not Available | Negative | 1108986 - 1109753 | 26982.6 |
| feccd family abc transporter permease | SCAB_RS04660 | Not Available | Negative | 1109755 - 1110810 | 35607.6 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |