Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhamnulokinase | SCAB_RS04465 | Not Available | Positive | 1065117 - 1066553 | 50412.0 |
| (fe-s)-binding protein | SCAB_RS04470 | Not Available | Positive | 1066652 - 1067407 | 27096.6 |
| lutb/lldf family l-lactate oxidation iron-sulfur protein | SCAB_RS04475 | Not Available | Positive | 1067404 - 1068891 | 53798.3 |
| lutc/ykgg family protein | SCAB_RS04480 | Not Available | Positive | 1068888 - 1069553 | 23866.2 |
| sam-dependent methyltransferase | SCAB_RS04485 | Not Available | Positive | 1069666 - 1070460 | 28487.9 |
| udgx family uracil-dna binding protein | SCAB_RS04490 | Not Available | Negative | 1070492 - 1071175 | 23969.7 |
| fur family transcriptional regulator | SCAB_RS04495 | Not Available | Positive | 1071392 - 1071835 | 15164.9 |
| catalase/peroxidase hpi | SCAB_RS04500 | Not Available | Positive | 1071860 - 1074073 | 79945.1 |
| cobalt-precorrin-5b (c(1))-methyltransferase | SCAB_RS04505 | Not Available | Positive | 1074245 - 1074723 | 16887.8 |
| sdr family oxidoreductase | SCAB_RS48250 | Not Available | Negative | 1074710 - 1075486 | 26499.9 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |