Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | 87.22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Solanum tuberosum, Daucus carota, Raphanus sativus |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
1456718 bp
Thymine Count
1440447 bp
Guanine Count
3612627 bp
Cytosine Count
3638903 bp
Genome Length
10148695 bp
Protein-coding Genes
8740 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase family deazaflavin-dependent oxidoreductase | SCAB_RS04265 | Not Available | Positive | 1024794 - 1025240 | 16486.4 |
| cation diffusion facilitator family transporter | SCAB_RS04270 | Not Available | Negative | 1025369 - 1026409 | 36040.1 |
| glutathione s-transferase family protein | SCAB_RS04275 | Not Available | Positive | 1026517 - 1027533 | 37624.1 |
| duf4235 domain-containing protein | SCAB_RS04280 | Not Available | Positive | 1027569 - 1027865 | 10532.7 |
| voc family protein | SCAB_RS04285 | Not Available | Negative | 1027884 - 1028276 | 14336.7 |
| duf1304 domain-containing protein | SCAB_RS04290 | Not Available | Positive | 1028566 - 1028928 | 12638.9 |
| tetr/acrr family transcriptional regulator | SCAB_RS04295 | Not Available | Positive | 1028925 - 1029497 | 20334.3 |
| nad(p)-dependent alcohol dehydrogenase | SCAB_RS04300 | Not Available | Negative | 1029617 - 1030726 | 37443.2 |
| aldehyde dehydrogenase family protein | SCAB_RS04305 | Not Available | Negative | 1030759 - 1032216 | 51112.6 |
| marr family winged helix-turn-helix transcriptional regulator | SCAB_RS04310 | Not Available | Positive | 1032365 - 1032793 | 16146.5 |
Pathways
530 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab | Causes | PMC11609053 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Common scab | Causes | PMC8914351 |