Pseudonocardia benzenivorans CB1190

Gram-positiverodAerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Pseudonocardia

Description

Pseudonocardia benzenivorans CB1190 is a Gram-positive, rod-shaped bacterium that thrives in aerobic conditions and is isolated from fresh water, particularly within sludge environments. This microbe is characterized by its non-spore-forming nature, making it reliant on favorable conditions for survival and proliferation. Its optimal growth temperature is around 30.0°C, indicating a preference for moderate thermal environments commonly found in natural water bodies. The habitat of Pseudonocardia benzenivorans CB1190 suggests its potential role in the microbial communities of freshwater ecosystems, particularly in the degradation of organic materials present in sludge. The presence of this organism in such environments may indicate its involvement in biogeochemical cycling processes, particularly in the breakdown of complex organic compounds. Further research could elucidate its specific metabolic pathways and interactions with other microorganisms in these habitats, thereby contributing to a better understanding of microbial dynamics in freshwater ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusPseudonocardia
SpeciesPseudonocardia dioxanivorans
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature30
Temperature rangeMesophilic
HabitatFresh water - Sludge
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudonocardia dioxanivorans CB1190 plasmid pPSED01, complete

Gene Summary

Adenine Count

29199 bp

Thymine Count

27108 bp

Guanine Count

68385 bp

Cytosine Count

67663 bp

Genome Length

192355 bp

Protein-coding Genes

200 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinPSED_RS33570Not AvailablePositive431 - 6016200.2
hypothetical proteinPSED_RS33575Not AvailablePositive1178 - 217036906.0
is481 family transposasePSED_RS33580Not AvailablePositive2173 - 361850706.9
hypothetical proteinPSED_RS33585Not AvailablePositive3745 - 39336611.25
hypothetical proteinPSED_RS33590Not AvailablePositive3940 - 444317441.2
is481 family transposasePSED_RS33595Not AvailablePositive4744 - 515714964.1
lipopolysaccharide biosynthesis proteinPSED_RS33600Not AvailableNegative5164 - 700264807.6
bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubigPSED_RS33605Not AvailableNegative7142 - 772621609.8
is481 family transposasePSED_RS33610Not AvailableNegative8826 - 980935501.2
is110 family transposasePSED_RS33615Not AvailableNegative9827 - 1088537603.3

Displaying genes 1 – 10 of 200 in total

Metabolites

104 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm0000950L-xyluloseC5H10O5Chemical structure of L-xylulose527-50-4
Average150.1299Da
Monoisotopic150.05282343Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da
BASm0001279(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6Chemical structure of (6S)-5-methyl-5,6,7,8-tetrahydrofolateNot available
Average457.4399Da
Monoisotopic457.1709815Da
BASm0001691hydrogenselenideHSeChemical structure of hydrogenselenideNot available
Average79.98Da
Monoisotopic80.924896Da

Displaying 1–10 of 104 metabolites

Health Effects

No health effects information available for this bacterium.