Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosomal replication initiator protein dnaa | RHPLAN_RS00005 | Not Available | Positive | 772 - 2202 | 53154.4 |
| dna polymerase iii subunit beta | RHPLAN_RS00010 | Not Available | Positive | 2380 - 3498 | 40248.2 |
| dna replication/repair protein recf | RHPLAN_RS00015 | Not Available | Positive | 3566 - 4705 | 40811.8 |
| hypothetical protein | RHPLAN_RS00020 | Not Available | Positive | 4829 - 5125 | 11108.0 |
| dna topoisomerase (atp-hydrolyzing) subunit b | RHPLAN_RS00025 | Not Available | Positive | 5279 - 7708 | 89205.0 |
| nuclear transport factor 2 family protein | RHPLAN_RS00030 | Not Available | Negative | 8070 - 8594 | 19705.7 |
| mfs transporter | RHPLAN_RS00035 | Not Available | Positive | 8730 - 10037 | 47137.3 |
| abc transporter permease | RHPLAN_RS00040 | Not Available | Negative | 10042 - 11166 | 40944.9 |
| ribosome-associated atpase/putative transporter rbba | RHPLAN_RS00045 | Not Available | Negative | 11172 - 13898 | 99524.3 |
| hlyd family secretion protein | RHPLAN_RS00050 | Not Available | Negative | 13895 - 14830 | 33901.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.