Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | RHPLAN_RS04830 | Not Available | Positive | 1042164 - 1043546 | 49506.4 |
| efflux rnd transporter permease subunit | RHPLAN_RS04835 | Not Available | Positive | 1043543 - 1046746 | 114537.0 |
| efflux rnd transporter permease subunit | RHPLAN_RS04840 | Not Available | Positive | 1046750 - 1049878 | 111676.0 |
| alpha/beta hydrolase | RHPLAN_RS04845 | Not Available | Negative | 1050121 - 1051062 | 34932.7 |
| duf2848 domain-containing protein | RHPLAN_RS04850 | Not Available | Positive | 1051202 - 1051861 | 24519.4 |
| abc transporter substrate-binding protein | RHPLAN_RS04855 | Not Available | Positive | 1052002 - 1052928 | 33222.2 |
| lysr family transcriptional regulator | RHPLAN_RS04860 | Not Available | Negative | 1052967 - 1053917 | 34553.8 |
| sdr family oxidoreductase | RHPLAN_RS04865 | Not Available | Positive | 1054052 - 1054873 | 29191.3 |
| organic hydroperoxide resistance protein | RHPLAN_RS04870 | Not Available | Positive | 1054917 - 1055360 | 15496.3 |
| alpha/beta fold hydrolase | RHPLAN_RS04875 | Not Available | Positive | 1055445 - 1056497 | 38215.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.