Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RHPLAN_RS04780 | Not Available | Negative | 1031417 - 1032412 | 37725.4 |
| abc transporter substrate-binding protein | RHPLAN_RS04785 | Not Available | Positive | 1032632 - 1033627 | 37667.6 |
| abc transporter permease | RHPLAN_RS04790 | Not Available | Positive | 1033636 - 1034412 | 28047.9 |
| abc transporter atp-binding protein | RHPLAN_RS04795 | Not Available | Positive | 1034415 - 1035212 | 29327.6 |
| abc transporter permease | RHPLAN_RS04800 | Not Available | Positive | 1035349 - 1036164 | 29544.0 |
| fumarylacetoacetate hydrolase family protein | RHPLAN_RS04805 | Not Available | Positive | 1036175 - 1037005 | 29979.1 |
| abc transporter substrate-binding protein | RHPLAN_RS04810 | Not Available | Negative | 1037127 - 1038122 | 35092.8 |
| abc transporter substrate-binding protein | RHPLAN_RS04815 | Not Available | Negative | 1038134 - 1039144 | 35832.5 |
| abc transporter substrate-binding protein | RHPLAN_RS04820 | Not Available | Positive | 1039323 - 1040291 | 34372.3 |
| efflux transporter outer membrane subunit | RHPLAN_RS04825 | Not Available | Positive | 1040584 - 1042047 | 52459.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.