Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclase family protein | RHPLAN_RS04730 | Not Available | Positive | 1020385 - 1021353 | 35633.6 |
| molybdopterin guanine dinucleotide-containing s/n-oxide reductase | RHPLAN_RS04735 | Not Available | Positive | 1021553 - 1023850 | 83075.3 |
| hypothetical protein | RHPLAN_RS04740 | Not Available | Negative | 1023944 - 1024315 | 13883.9 |
| cobalamin-independent methionine synthase ii family protein | RHPLAN_RS04745 | Not Available | Negative | 1024312 - 1025484 | 42823.2 |
| ethanolamine ammonia-lyase subunit eutc | RHPLAN_RS04750 | Not Available | Negative | 1025481 - 1026284 | 28699.3 |
| ethanolamine ammonia-lyase subunit eutb | RHPLAN_RS04755 | Not Available | Negative | 1026290 - 1027666 | 48970.0 |
| thiamine pyrophosphate-binding protein | RHPLAN_RS04760 | Not Available | Positive | 1027772 - 1029463 | 60584.8 |
| response regulator | RHPLAN_RS04765 | Not Available | Negative | 1029682 - 1030101 | 15457.7 |
| hypothetical protein | RHPLAN_RS04770 | Not Available | Negative | 1030227 - 1030484 | 9713.1 |
| glutathione s-transferase family protein | RHPLAN_RS04775 | Not Available | Negative | 1030626 - 1031420 | 30415.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.