Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | RHPLAN_RS04680 | Not Available | Negative | 1010770 - 1011558 | 29107.5 |
| abc transporter substrate-binding protein | RHPLAN_RS04685 | Not Available | Negative | 1011581 - 1012579 | 35340.9 |
| oxaloacetate decarboxylase | RHPLAN_RS04690 | Not Available | Negative | 1012576 - 1013454 | 31542.9 |
| enolase c-terminal domain-like protein | RHPLAN_RS04695 | Not Available | Negative | 1013498 - 1014667 | 42193.4 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS04700 | Not Available | Negative | 1014692 - 1015675 | 34599.8 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS04705 | Not Available | Negative | 1015726 - 1016718 | 34758.5 |
| llm class flavin-dependent oxidoreductase | RHPLAN_RS04710 | Not Available | Positive | 1016810 - 1017940 | 41116.1 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS04715 | Not Available | Negative | 1018083 - 1019063 | 34278.6 |
| hypothetical protein | RHPLAN_RS04720 | Not Available | Positive | 1019198 - 1019773 | 20757.7 |
| cupin domain-containing protein | RHPLAN_RS04725 | Not Available | Positive | 1019776 - 1020327 | 19806.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.