Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
doxx family proteinRHPLAN_RS04635Not AvailableNegative1001441 - 100192017102.2
llm class flavin-dependent oxidoreductaseRHPLAN_RS04640Not AvailableNegative1002086 - 100345050543.8
fad-dependent oxidoreductaseRHPLAN_RS04645Not AvailableNegative1003512 - 100491849380.2
tripartite tricarboxylate transporter substrate binding proteinRHPLAN_RS04650Not AvailableNegative1005113 - 100609034184.3
cupin domain-containing proteinRHPLAN_RS04655Not AvailableNegative1006121 - 100662718121.8
d-2-hydroxyacid dehydrogenaseRHPLAN_RS04660Not AvailableNegative1006689 - 100765434713.6
gdccvxc domain-containing (seleno)proteinRHPLAN_RS40445Not AvailablePositive1007946 - 10081256256.58
abc transporter substrate-binding proteinRHPLAN_RS04665Not AvailableNegative1008118 - 100911637129.2
abc transporter permeaseRHPLAN_RS04670Not AvailableNegative1009203 - 101004229888.7
abc transporter permeaseRHPLAN_RS04675Not AvailableNegative1010021 - 101077326638.4

Displaying genes 941 – 950 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.