Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
inorganic phosphate transporterRHPLAN_RS04585Not AvailableNegative991069 - 99206735136.6
duf47 domain-containing proteinRHPLAN_RS04590Not AvailableNegative992079 - 99274725119.8
hypothetical proteinRHPLAN_RS04595Not AvailablePositive993339 - 9935487846.66
thiamine pyrophosphate-binding proteinRHPLAN_RS04600Not AvailablePositive993762 - 99557964416.0
abc transporter atp-binding proteinRHPLAN_RS04605Not AvailablePositive995598 - 99644030649.8
abc transporter permeaseRHPLAN_RS04610Not AvailablePositive996437 - 99720428090.4
abc transporter permeaseRHPLAN_RS04615Not AvailablePositive997201 - 99804030186.2
murein l,d-transpeptidaseRHPLAN_RS04620Not AvailableNegative998113 - 99993966664.6
pilz domain-containing proteinRHPLAN_RS04625Not AvailableNegative1000187 - 100046510631.7
class ii aldolase/adducin family proteinRHPLAN_RS04630Not AvailableNegative1000606 - 100141230014.9

Displaying genes 931 – 940 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.