Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dioxygenaseRHPLAN_RS04540Not AvailablePositive981705 - 98267035421.3
lytic transglycosylase domain-containing proteinRHPLAN_RS04545Not AvailableNegative982987 - 98391633424.5
amino acid abc transporter substrate-binding proteinRHPLAN_RS04550Not AvailableNegative983980 - 98524845218.6
amino acid abc transporter substrate-binding proteinRHPLAN_RS04555Not AvailableNegative985321 - 98658944753.8
voc family proteinRHPLAN_RS04560Not AvailableNegative986761 - 98769335371.3
nad-binding proteinRHPLAN_RS40890Not AvailableNegative987690 - 98810914875.1
is5/is1182 family transposaseRHPLAN_RS40895Not AvailableNegative988110 - 98858016115.6
ycii family proteinRHPLAN_RS04570Not AvailableNegative988605 - 98898813755.8
methyl-accepting chemotaxis proteinRHPLAN_RS04575Not AvailablePositive989248 - 99059147276.3
nudix hydrolaseRHPLAN_RS04580Not AvailableNegative990620 - 99106616516.3

Displaying genes 921 – 930 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.