Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RHPLAN_RS00390 | Not Available | Negative | 87696 - 88643 | 32775.3 |
| adenosine kinase | RHPLAN_RS00395 | Not Available | Negative | 88707 - 89708 | 35124.9 |
| tryptophan--trna ligase | RHPLAN_RS00400 | Not Available | Positive | 89881 - 90954 | 39158.9 |
| universal stress protein | RHPLAN_RS00405 | Not Available | Positive | 91063 - 91563 | 17953.2 |
| nifu family protein | RHPLAN_RS00410 | Not Available | Positive | 91702 - 92256 | 19850.7 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | RHPLAN_RS00415 | Not Available | Positive | 92423 - 93106 | 23624.7 |
| gnat family n-acetyltransferase | RHPLAN_RS00420 | Not Available | Positive | 93103 - 93588 | 17733.4 |
| fur family transcriptional regulator | RHPLAN_RS00425 | Not Available | Positive | 93724 - 94107 | 14944.7 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | RHPLAN_RS00430 | Not Available | Positive | 94293 - 96671 | 85725.9 |
| mfs transporter | RHPLAN_RS00435 | Not Available | Positive | 96700 - 98133 | 50356.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.