Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
molybdopterin cofactor-binding domain-containing proteinRHPLAN_RS04340Not AvailablePositive935882 - 93811679882.9
abc transporter substrate-binding proteinRHPLAN_RS04345Not AvailablePositive938269 - 93926737255.1
fad-dependent monooxygenaseRHPLAN_RS04350Not AvailableNegative939292 - 94042541231.8
marr family winged helix-turn-helix transcriptional regulatorRHPLAN_RS04355Not AvailablePositive940676 - 94111316186.8
tripartite tricarboxylate transporter substrate binding proteinRHPLAN_RS04360Not AvailablePositive941368 - 94234234156.9
marr family winged helix-turn-helix transcriptional regulatorRHPLAN_RS04365Not AvailableNegative942511 - 94286412888.0
tripartite tricarboxylate transporter substrate binding proteinRHPLAN_RS04370Not AvailableNegative942996 - 94397633524.9
llm class flavin-dependent oxidoreductaseRHPLAN_RS04375Not AvailablePositive944139 - 94548849720.2
fumarylacetoacetaseRHPLAN_RS04380Not AvailablePositive945806 - 94711646936.6
sdr family nad(p)-dependent oxidoreductaseRHPLAN_RS04385Not AvailablePositive947205 - 94797826143.6

Displaying genes 881 – 890 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.