Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinRHPLAN_RS04290Not AvailableNegative927460 - 92826028882.8
iclr family transcriptional regulatorRHPLAN_RS04295Not AvailablePositive928495 - 92943333413.6
cupin domain-containing proteinRHPLAN_RS04300Not AvailablePositive929473 - 93000319720.5
voc family proteinRHPLAN_RS04305Not AvailablePositive930093 - 93104334602.8
hypothetical proteinRHPLAN_RS04310Not AvailablePositive931055 - 93142013172.5
sdr family oxidoreductaseRHPLAN_RS04315Not AvailablePositive931443 - 93220127149.7
fad-dependent monooxygenaseRHPLAN_RS04320Not AvailablePositive932213 - 93334040681.5
tripartite tricarboxylate transporter substrate binding proteinRHPLAN_RS04325Not AvailablePositive933380 - 93436334113.6
lysr family transcriptional regulatorRHPLAN_RS04330Not AvailablePositive934388 - 93530533329.0
(2fe-2s)-binding proteinRHPLAN_RS04335Not AvailablePositive935458 - 93590116100.4

Displaying genes 871 – 880 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.