Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase family protein | RHPLAN_RS04190 | Not Available | Negative | 907867 - 909264 | 50539.7 |
| cupin domain-containing protein | RHPLAN_RS04195 | Not Available | Negative | 909418 - 909927 | 19202.3 |
| (2fe-2s)-binding protein | RHPLAN_RS04200 | Not Available | Negative | 909967 - 910455 | 17524.1 |
| xanthine dehydrogenase family protein subunit m | RHPLAN_RS04205 | Not Available | Negative | 910443 - 911261 | 29138.3 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | RHPLAN_RS04210 | Not Available | Negative | 911258 - 913690 | 87001.8 |
| alpha/beta fold hydrolase | RHPLAN_RS40080 | Not Available | Positive | 913838 - 914749 | 33920.5 |
| hypothetical protein | RHPLAN_RS04220 | Not Available | Positive | 914857 - 915228 | 13226.6 |
| Trna-arg | Not Available | Not Available | Positive | 915345 - 915421 | Not Available |
| aromatic ring-hydroxylating dioxygenase subunit alpha | RHPLAN_RS04230 | Not Available | Negative | 915633 - 916706 | 40753.2 |
| recombinase-like helix-turn-helix domain-containing protein | RHPLAN_RS04235 | Not Available | Negative | 916709 - 916936 | 8344.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.