Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tylf/mycf/novp-related o-methyltransferase | RHPLAN_RS04090 | Not Available | Negative | 886333 - 887082 | 28090.8 |
| glycosyltransferase family 1 protein | RHPLAN_RS04095 | Not Available | Positive | 887252 - 888091 | 30799.2 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS04100 | Not Available | Negative | 888097 - 889059 | 33871.9 |
| aldo/keto reductase | RHPLAN_RS04105 | Not Available | Negative | 889136 - 890182 | 37532.8 |
| tetr/acrr family transcriptional regulator | RHPLAN_RS04110 | Not Available | Positive | 890297 - 890890 | 20886.9 |
| slc26a/sulp transporter family protein | RHPLAN_RS04115 | Not Available | Negative | 890912 - 893122 | 78527.0 |
| m48 family metalloprotease | RHPLAN_RS04120 | Not Available | Negative | 893315 - 894712 | 51035.8 |
| thermonuclease family protein | RHPLAN_RS04125 | Not Available | Negative | 894808 - 895587 | 27695.1 |
| hypothetical protein | RHPLAN_RS04130 | Not Available | Negative | 895746 - 895961 | 7743.22 |
| ubid family decarboxylase | RHPLAN_RS04135 | Not Available | Negative | 896064 - 897767 | 62977.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.