Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-binding s4 domain-containing protein | RHPLAN_RS04040 | Not Available | Positive | 878092 - 878484 | 14473.4 |
| ferredoxin fdxa | RHPLAN_RS04045 | Not Available | Positive | 878574 - 878912 | 12443.6 |
| card family transcriptional regulator | RHPLAN_RS04050 | Not Available | Positive | 879175 - 879966 | 28404.9 |
| sugar o-acetyltransferase | RHPLAN_RS04055 | Not Available | Positive | 880108 - 880641 | 18914.7 |
| amidohydrolase | RHPLAN_RS04060 | Not Available | Positive | 880730 - 881617 | 32950.7 |
| fad-dependent monooxygenase | RHPLAN_RS04065 | Not Available | Negative | 881762 - 882955 | 44156.9 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS04070 | Not Available | Negative | 882968 - 883939 | 34068.2 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS04075 | Not Available | Negative | 883943 - 884941 | 35813.9 |
| alpha/beta hydrolase | RHPLAN_RS04080 | Not Available | Positive | 885099 - 885998 | 33458.8 |
| hypothetical protein | RHPLAN_RS04085 | Not Available | Positive | 886074 - 886310 | 8475.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.