Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| comf family protein | RHPLAN_RS03885 | Not Available | Negative | 844908 - 845654 | 26811.6 |
| methyltransferase domain-containing protein | RHPLAN_RS03890 | Not Available | Positive | 845834 - 846766 | 33601.2 |
| flp family type ivb pilin | RHPLAN_RS03895 | Not Available | Negative | 846790 - 846984 | 6788.19 |
| 8-oxo-dgtp diphosphatase mutt | RHPLAN_RS03900 | Not Available | Negative | 847013 - 847411 | 14829.3 |
| bifunctional glutamate n-acetyltransferase/amino-acid acetyltransferase argj | RHPLAN_RS03905 | Not Available | Negative | 847538 - 848779 | 42786.6 |
| peptidylprolyl isomerase | RHPLAN_RS03910 | Not Available | Negative | 849048 - 849818 | 28240.8 |
| preprotein translocase subunit seca | RHPLAN_RS03915 | Not Available | Positive | 850240 - 853047 | 105151.0 |
| murein l,d-transpeptidase family protein | RHPLAN_RS03920 | Not Available | Negative | 853124 - 854698 | 56001.1 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | RHPLAN_RS03925 | Not Available | Negative | 854963 - 855922 | 34408.0 |
| hypothetical protein | RHPLAN_RS03930 | Not Available | Positive | 856052 - 856261 | 7962.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.