Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 1 | RHPLAN_RS03835 | Not Available | Negative | 833870 - 834952 | 39815.5 |
| phosphoenolpyruvate--protein phosphotransferase | RHPLAN_RS03840 | Not Available | Negative | 834949 - 837216 | 82603.3 |
| aspartate kinase | RHPLAN_RS03845 | Not Available | Negative | 837421 - 838671 | 44305.0 |
| udgx family uracil-dna binding protein | RHPLAN_RS03850 | Not Available | Negative | 838781 - 840211 | 53550.7 |
| putative dna modification/repair radical sam protein | RHPLAN_RS03855 | Not Available | Negative | 840215 - 841432 | 45046.0 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | RHPLAN_RS03860 | Not Available | Positive | 841524 - 842276 | 27559.1 |
| dmt family transporter | RHPLAN_RS03865 | Not Available | Positive | 842311 - 843210 | 31344.5 |
| duf1178 family protein | RHPLAN_RS03870 | Not Available | Negative | 843225 - 843716 | 18235.6 |
| carbon-nitrogen hydrolase family protein | RHPLAN_RS03875 | Not Available | Negative | 843713 - 844603 | 32170.2 |
| glutaredoxin 3 | RHPLAN_RS03880 | Not Available | Negative | 844600 - 844869 | 9748.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.