Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | RHPLAN_RS37930 | Not Available | Positive | 8166938 - 8167645 | 26416.7 |
| hypothetical protein | RHPLAN_RS37935 | Not Available | Positive | 8167747 - 8168319 | 20170.0 |
| alpha/beta fold hydrolase | RHPLAN_RS37940 | Not Available | Positive | 8168599 - 8169399 | 29989.1 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS37945 | Not Available | Positive | 8169453 - 8170430 | 34250.9 |
| pas-domain containing protein | RHPLAN_RS37950 | Not Available | Negative | 8170438 - 8176014 | 206494.0 |
| doxx family protein | RHPLAN_RS37955 | Not Available | Positive | 8176217 - 8176606 | 13161.3 |
| hypothetical protein | RHPLAN_RS37960 | Not Available | Negative | 8176701 - 8177021 | 11725.0 |
| nadp-dependent malic enzyme | RHPLAN_RS37965 | Not Available | Positive | 8177214 - 8179484 | 81875.1 |
| mbl fold metallo-hydrolase | RHPLAN_RS37970 | Not Available | Negative | 8179679 - 8180575 | 33120.6 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS37975 | Not Available | Negative | 8180585 - 8181562 | 34083.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.