Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s1c family serine protease | RHPLAN_RS37880 | Not Available | Negative | 8157522 - 8158499 | 34558.5 |
| hypothetical protein | RHPLAN_RS37885 | Not Available | Positive | 8158753 - 8159688 | 32457.0 |
| llm class flavin-dependent oxidoreductase | RHPLAN_RS37890 | Not Available | Positive | 8159787 - 8160797 | 36873.0 |
| hypothetical protein | RHPLAN_RS37895 | Not Available | Negative | 8160851 - 8161357 | 18220.2 |
| dienelactone hydrolase family protein | RHPLAN_RS37900 | Not Available | Positive | 8161589 - 8162266 | 24687.4 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS37905 | Not Available | Negative | 8162335 - 8163306 | 34440.1 |
| polysaccharide biosynthesis/export family protein | RHPLAN_RS37910 | Not Available | Negative | 8163371 - 8164036 | 24169.0 |
| na+/h+ antiporter nhaa | RHPLAN_RS37915 | Not Available | Negative | 8164093 - 8165289 | 41808.5 |
| peptide-methionine (s)-s-oxide reductase msra | RHPLAN_RS37920 | Not Available | Negative | 8165527 - 8166195 | 24040.3 |
| heme-binding protein | RHPLAN_RS37925 | Not Available | Positive | 8166398 - 8166886 | 16759.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.