Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase family protein | RHPLAN_RS37835 | Not Available | Positive | 8149268 - 8149909 | 23209.9 |
| is5/is1182 family transposase | RHPLAN_RS40345 | Not Available | Positive | 8149960 - 8150067 | 4019.91 |
| hypothetical protein | RHPLAN_RS37840 | Not Available | Positive | 8150148 - 8150654 | 17489.5 |
| nad(p)-dependent alcohol dehydrogenase | RHPLAN_RS37845 | Not Available | Negative | 8150661 - 8151674 | 35415.9 |
| oxaloacetate decarboxylase | RHPLAN_RS37850 | Not Available | Negative | 8151706 - 8152566 | 31079.4 |
| lvivd repeat-containing protein | RHPLAN_RS37855 | Not Available | Positive | 8152753 - 8154222 | 53574.7 |
| is630 family transposase | RHPLAN_RS40850 | Not Available | Negative | 8154381 - 8154932 | 20449.9 |
| transposase | RHPLAN_RS40855 | Not Available | Negative | 8154969 - 8155367 | 14894.2 |
| response regulator | RHPLAN_RS37870 | Not Available | Negative | 8155419 - 8155910 | 18297.0 |
| mfs transporter | RHPLAN_RS37875 | Not Available | Negative | 8156012 - 8157250 | 42824.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.