Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | RHPLAN_RS37785 | Not Available | Positive | 8138980 - 8139780 | 28960.0 |
| tex family protein | RHPLAN_RS37790 | Not Available | Positive | 8139932 - 8142256 | 84202.0 |
| atp-binding cassette domain-containing protein | RHPLAN_RS38895 | Not Available | Negative | 8142276 - 8143385 | 40743.1 |
| abc transporter permease devc | RHPLAN_RS37800 | Not Available | Negative | 8143385 - 8144599 | 45225.3 |
| abc transporter permease devc | RHPLAN_RS37805 | Not Available | Negative | 8144602 - 8145732 | 40971.6 |
| efflux rnd transporter periplasmic adaptor subunit | RHPLAN_RS37810 | Not Available | Negative | 8145729 - 8146859 | 40269.3 |
| Trna-arg | Not Available | Not Available | Positive | 8147118 - 8147194 | Not Available |
| had hydrolase-like protein | RHPLAN_RS37820 | Not Available | Positive | 8147204 - 8147842 | 23165.1 |
| hypothetical protein | RHPLAN_RS37825 | Not Available | Negative | 8147909 - 8148157 | 8990.77 |
| aldo/keto reductase | RHPLAN_RS37830 | Not Available | Positive | 8148295 - 8149140 | 30609.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.