Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | RHPLAN_RS37735 | Not Available | Positive | 8124802 - 8125548 | 26993.4 |
| nuclear transport factor 2 family protein | RHPLAN_RS37740 | Not Available | Negative | 8125697 - 8126140 | 16134.1 |
| abc transporter substrate-binding protein | RHPLAN_RS37745 | Not Available | Positive | 8126411 - 8127619 | 42613.4 |
| branched-chain amino acid abc transporter permease | RHPLAN_RS37750 | Not Available | Positive | 8127710 - 8128579 | 29884.7 |
| branched-chain amino acid abc transporter atp-binding protein/permease | RHPLAN_RS37755 | Not Available | Positive | 8128582 - 8131083 | 86975.3 |
| amidohydrolase family protein | RHPLAN_RS37760 | Not Available | Positive | 8131087 - 8132316 | 43951.6 |
| fecr domain-containing protein | RHPLAN_RS37765 | Not Available | Negative | 8132374 - 8133288 | 31053.2 |
| lipopolysaccharide assembly protein lapb | RHPLAN_RS37770 | Not Available | Negative | 8133299 - 8134681 | 51467.6 |
| glycosyltransferase | RHPLAN_RS37775 | Not Available | Negative | 8134906 - 8136687 | 66428.5 |
| glycosyltransferase | RHPLAN_RS37780 | Not Available | Negative | 8136671 - 8138638 | 73017.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.