Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase family protein | RHPLAN_RS37685 | Not Available | Positive | 8115491 - 8117005 | 55591.2 |
| rieske 2fe-2s domain-containing protein | RHPLAN_RS37690 | Not Available | Positive | 8117067 - 8117435 | 13252.7 |
| abc transporter permease | RHPLAN_RS37695 | Not Available | Positive | 8117449 - 8118264 | 29151.4 |
| abc transporter substrate-binding protein | RHPLAN_RS37700 | Not Available | Positive | 8118302 - 8119333 | 36350.9 |
| abc transporter atp-binding protein | RHPLAN_RS37705 | Not Available | Positive | 8119356 - 8120189 | 30687.2 |
| abc transporter atp-binding protein | RHPLAN_RS37710 | Not Available | Positive | 8120227 - 8121084 | 31541.5 |
| abc transporter permease | RHPLAN_RS37715 | Not Available | Positive | 8121106 - 8121864 | 27768.1 |
| llm class flavin-dependent oxidoreductase | RHPLAN_RS37720 | Not Available | Positive | 8121884 - 8122915 | 37696.1 |
| polysaccharide deacetylase family protein | RHPLAN_RS37725 | Not Available | Positive | 8122929 - 8123774 | 32002.3 |
| abc transporter substrate-binding protein | RHPLAN_RS37730 | Not Available | Positive | 8123792 - 8124754 | 34588.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.