Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mmge/prpd family proteinRHPLAN_RS03730Not AvailablePositive814227 - 81563950457.4
molybdopterin-dependent oxidoreductaseRHPLAN_RS03735Not AvailablePositive815778 - 81704646486.5
c-type cytochromeRHPLAN_RS03740Not AvailablePositive817033 - 81762621371.0
(2fe-2s)-binding proteinRHPLAN_RS03745Not AvailablePositive817688 - 81815516183.0
hypothetical proteinRHPLAN_RS03750Not AvailablePositive818181 - 81875920547.9
hypothetical proteinRHPLAN_RS03755Not AvailablePositive818798 - 81925316773.2
abc transporter atp-binding proteinRHPLAN_RS03760Not AvailableNegative820171 - 82096828785.2
abc transporter permeaseRHPLAN_RS03765Not AvailableNegative820972 - 82171226929.4
abc transporter substrate-binding proteinRHPLAN_RS03770Not AvailableNegative821785 - 82278635726.2
sdr family nad(p)-dependent oxidoreductaseRHPLAN_RS03775Not AvailablePositive822952 - 82372828177.6

Displaying genes 761 – 770 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.