Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug effflux mfs transporter | RHPLAN_RS37585 | Not Available | Negative | 8092744 - 8093946 | 42014.5 |
| m48 family metallopeptidase | RHPLAN_RS37590 | Not Available | Negative | 8094018 - 8094782 | 28941.8 |
| polyhydroxyalkanoate depolymerase | RHPLAN_RS37595 | Not Available | Negative | 8094870 - 8096201 | 49769.9 |
| abc transporter permease | RHPLAN_RS37600 | Not Available | Negative | 8096388 - 8097224 | 31588.8 |
| abc transporter atp-binding protein | RHPLAN_RS37605 | Not Available | Negative | 8097457 - 8098212 | 27795.5 |
| acts/prrb/regb family redox-sensitive histidine kinase | RHPLAN_RS37610 | Not Available | Positive | 8098383 - 8099747 | 49811.4 |
| actr/prra/rega family redox response regulator transcription factor | RHPLAN_RS37615 | Not Available | Positive | 8099803 - 8100354 | 20169.3 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS37620 | Not Available | Negative | 8100492 - 8101526 | 36618.2 |
| peptidyl-alpha-hydroxyglycine alpha-amidating lyase family protein | RHPLAN_RS37625 | Not Available | Negative | 8101526 - 8102626 | 40242.8 |
| methyl-accepting chemotaxis protein | RHPLAN_RS37630 | Not Available | Negative | 8102829 - 8104544 | 60608.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.