Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RHPLAN_RS37535 | Not Available | Negative | 8078326 - 8078871 | 19488.6 |
| dna mismatch repair protein muts | RHPLAN_RS37540 | Not Available | Positive | 8079019 - 8081736 | 98051.5 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS37545 | Not Available | Positive | 8081818 - 8082804 | 34229.5 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS37550 | Not Available | Positive | 8082843 - 8083817 | 34282.6 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS37555 | Not Available | Positive | 8083856 - 8084830 | 34391.6 |
| hypothetical protein | RHPLAN_RS37560 | Not Available | Negative | 8084885 - 8085682 | 27835.2 |
| alcohol dehydrogenase | RHPLAN_RS37565 | Not Available | Negative | 8085835 - 8086896 | 36470.7 |
| [protein-pii] uridylyltransferase | RHPLAN_RS37570 | Not Available | Positive | 8087203 - 8089968 | 104083.0 |
| hypothetical protein | RHPLAN_RS37575 | Not Available | Negative | 8090106 - 8090330 | 7790.63 |
| transglycosylase domain-containing protein | RHPLAN_RS37580 | Not Available | Positive | 8090572 - 8092734 | 76946.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.