Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | RHPLAN_RS37485 | Not Available | Positive | 8067382 - 8068167 | 27864.3 |
| sdr family oxidoreductase | RHPLAN_RS37490 | Not Available | Positive | 8068164 - 8068940 | 27556.6 |
| alpha/beta fold hydrolase | RHPLAN_RS37495 | Not Available | Negative | 8068937 - 8070187 | 47073.3 |
| amp-binding protein | RHPLAN_RS37500 | Not Available | Negative | 8070196 - 8071728 | 55274.3 |
| methyltransferase | RHPLAN_RS37505 | Not Available | Negative | 8071741 - 8072793 | 37569.4 |
| trap transporter substrate-binding protein | RHPLAN_RS37510 | Not Available | Positive | 8072996 - 8074018 | 37370.9 |
| trap transporter small permease | RHPLAN_RS37515 | Not Available | Positive | 8074149 - 8074646 | 18848.3 |
| trap transporter large permease | RHPLAN_RS37520 | Not Available | Positive | 8074651 - 8075949 | 45742.9 |
| amidohydrolase family protein | RHPLAN_RS37525 | Not Available | Positive | 8076168 - 8077187 | 38620.7 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | RHPLAN_RS37530 | Not Available | Positive | 8077300 - 8078070 | 27697.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.