Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme-binding protein | RHPLAN_RS37435 | Not Available | Negative | 8058077 - 8058568 | 16561.0 |
| amidohydrolase family protein | RHPLAN_RS37440 | Not Available | Negative | 8058573 - 8059442 | 32623.2 |
| 3-oxoadipyl-coa thiolase | RHPLAN_RS37445 | Not Available | Negative | 8059587 - 8060792 | 41937.6 |
| abc transporter substrate-binding protein | RHPLAN_RS37450 | Not Available | Negative | 8060815 - 8061792 | 33822.2 |
| abc transporter substrate-binding protein | RHPLAN_RS37455 | Not Available | Negative | 8061789 - 8062766 | 34660.9 |
| duf3237 domain-containing protein | RHPLAN_RS37460 | Not Available | Positive | 8062873 - 8063331 | 16644.0 |
| crotonase/enoyl-coa hydratase family protein | RHPLAN_RS37465 | Not Available | Positive | 8063434 - 8064249 | 28864.6 |
| feruloyl-coa synthase | RHPLAN_RS37470 | Not Available | Positive | 8064253 - 8066133 | 68095.9 |
| sdr family nad(p)-dependent oxidoreductase | RHPLAN_RS37475 | Not Available | Positive | 8066139 - 8066900 | 26006.7 |
| thioesterase family protein | RHPLAN_RS37480 | Not Available | Positive | 8066935 - 8067357 | 16411.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.