Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| caib/baif coa-transferase family protein | RHPLAN_RS37335 | Not Available | Negative | 8036195 - 8037316 | 39861.9 |
| giy-yig nuclease family protein | RHPLAN_RS37340 | Not Available | Negative | 8037386 - 8037673 | 11452.7 |
| acyl-coa dehydrogenase family protein | RHPLAN_RS37345 | Not Available | Negative | 8037747 - 8038916 | 42330.9 |
| maoc/paaz c-terminal domain-containing protein | RHPLAN_RS37350 | Not Available | Negative | 8038913 - 8039773 | 31204.7 |
| sdr family oxidoreductase | RHPLAN_RS37355 | Not Available | Negative | 8039828 - 8040742 | 32554.1 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | RHPLAN_RS37360 | Not Available | Negative | 8041003 - 8042109 | 41331.6 |
| amino acid abc transporter substrate-binding protein | RHPLAN_RS37365 | Not Available | Negative | 8042304 - 8043572 | 46247.0 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | RHPLAN_RS37370 | Not Available | Negative | 8043601 - 8044710 | 41277.5 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | RHPLAN_RS37375 | Not Available | Negative | 8044927 - 8046033 | 41619.9 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | RHPLAN_RS37380 | Not Available | Negative | 8046216 - 8047322 | 41592.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.