Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf1345 domain-containing proteinRHPLAN_RS37235Not AvailablePositive8015475 - 801615224252.8
na+/h+ antiporterRHPLAN_RS37240Not AvailablePositive8016159 - 801776358200.1
tylf/mycf/novp-related o-methyltransferaseRHPLAN_RS37245Not AvailableNegative8018315 - 801907629042.8
duf3095 domain-containing proteinRHPLAN_RS37250Not AvailablePositive8019172 - 802032942182.8
duf1989 domain-containing proteinRHPLAN_RS37255Not AvailablePositive8020508 - 802113723622.5
taud/tfda family dioxygenaseRHPLAN_RS37260Not AvailableNegative8021362 - 802224632977.9
hypothetical proteinRHPLAN_RS37265Not AvailableNegative8022458 - 802315625327.3
5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferaseRHPLAN_RS37270Not AvailablePositive8023363 - 802448441119.4
hypothetical proteinRHPLAN_RS37275Not AvailableNegative8024548 - 802492213559.8
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseRHPLAN_RS37280Not AvailableNegative8025046 - 802629944362.5

Displaying genes 7611 – 7620 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.