Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa c-acetyltransferase | RHPLAN_RS37185 | Not Available | Negative | 8005266 - 8006444 | 40547.8 |
| polyhydroxyalkanoate synthesis repressor phar | RHPLAN_RS37190 | Not Available | Positive | 8006720 - 8007319 | 22455.6 |
| do family serine endopeptidase | RHPLAN_RS37195 | Not Available | Negative | 8007439 - 8008968 | 52593.4 |
| bifunctional diguanylate cyclase/phosphodiesterase | RHPLAN_RS37200 | Not Available | Negative | 8009124 - 8010977 | 67582.3 |
| hypothetical protein | RHPLAN_RS37205 | Not Available | Positive | 8011170 - 8011412 | 8868.64 |
| gamma-glutamyltransferase | RHPLAN_RS37210 | Not Available | Negative | 8011419 - 8013002 | 55771.2 |
| hypothetical protein | RHPLAN_RS37215 | Not Available | Negative | 8013010 - 8013423 | 15231.3 |
| 50s ribosomal protein l32 | RHPLAN_RS37220 | Not Available | Negative | 8013460 - 8013645 | 6955.48 |
| monofunctional biosynthetic peptidoglycan transglycosylase | RHPLAN_RS37225 | Not Available | Negative | 8013773 - 8014474 | 25798.0 |
| polyprenyl synthetase family protein | RHPLAN_RS37230 | Not Available | Positive | 8014503 - 8015456 | 33305.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.