Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylate/guanylate cyclase domain-containing protein | RHPLAN_RS37135 | Not Available | Positive | 7993142 - 7994749 | 58206.1 |
| elongation factor p | RHPLAN_RS37140 | Not Available | Negative | 7994868 - 7995434 | 20686.6 |
| ef-p lysine aminoacylase epma | RHPLAN_RS37145 | Not Available | Positive | 7995574 - 7996620 | 38853.2 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS37150 | Not Available | Positive | 7996695 - 7997657 | 33496.2 |
| lysine-2,3-aminomutase-like protein | RHPLAN_RS37155 | Not Available | Positive | 7997723 - 7998775 | 38214.1 |
| cupin domain-containing protein | RHPLAN_RS37160 | Not Available | Positive | 7998772 - 7999176 | 14913.6 |
| autotransporter domain-containing protein | RHPLAN_RS37165 | Not Available | Positive | 7999324 - 8001891 | 86511.5 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS37170 | Not Available | Negative | 8001896 - 8002861 | 33928.8 |
| ubid family decarboxylase | RHPLAN_RS37175 | Not Available | Negative | 8002908 - 8004251 | 48465.7 |
| acetoacetyl-coa reductase | RHPLAN_RS37180 | Not Available | Negative | 8004293 - 8005018 | 25495.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.